% nar.bst was created by Tom Schneider from unsrt.bst % version = 3.19 of nar.bst 2011 Dec 23 % 2011 Dec 23, 3.19 correct year % 2011 Dec 23, 3.18 inproceedings bug, line 555 needs another '*' % thanks to David Koes dkoes % 2010 Dec 05, 3.17 for incollection bug % format bvolume needed a '*' % 2010 Mar 11, 3.16 techreport - add commas after author and number % 2010 Mar 11, 3.15 make unpublished not have two titles ... & date at start % 2010 Mar 07, 3.14 Changes from Wolfgang Langer! % 2001 Nov 12, 3.13 volume just before pages for inproceedings % 2001 Nov 12, 3.12 editor names reversed again... % 2001 Jun 15, 3.11 period after title (was comma) % 2000 Sep 13, 3.10 introduction of titles as per new NAR instructions % 1994 November 30, 3.09 previous version % Dr. Thomas D. Schneider, Ph.D. % National Institutes of Health % schneidt@mail.nih.gov % toms@alum.mit.edu (permanent) % http://alum.mit.edu/www/toms (permanent) % This is the bibliography definition for % Nucleic Acids Research % http://nar.oupjournals.org/ % The instructions for authors are at % http://www3.oup.co.uk/nar/instauth/ % about titles: % http://www3.oup.co.uk/nar/instauth/editorial_28_17.html % This first appeared in NAR Volume 28, Issue 17, September 1 2000. % % Titles in References; Papers Longer than 10 % Printed Pages % % At the recent Editors' Meeting it was decided that in future all % papers, not just Surveys and Summaries, will have titles % included in their reference lists. Starting immediately, all % authors will be encouraged to include titles, and this will % become mandatory for all papers published after January 1 st % 2001. The suggested page limit of 8 pages will be relaxed to % accommodate this. Some papers require extra space, and so in % future all papers longer than 10 pages will incur a per excess % printed page charge of euro 20/$200 to help offset the increased % costs of production. This charge for pages in excess of 10 will % be applied to all printed papers published after January 1st % 2001. Note that the charge will not apply to papers published % solely in NAR Methods Online, nor to data published online as % `Supplementary Material'. Also, the journal will continue to % offer free colour printing. % BibTeX standard bibliography style `unsrt' % version 0.99a for BibTeX versions 0.99a or later, LaTeX version 2.09. % Copyright (C) 1985, all rights reserved. % Copying of this file is authorized only if either % (1) you make absolutely no changes to your copy, including name, or % (2) if you do make changes, you name it something other than % btxbst.doc, plain.bst, unsrt.bst, alpha.bst, and abbrv.bst. % This restriction helps ensure that all standard styles are identical. % The file btxbst.doc has the documentation for this style. ENTRY { address author booktitle chapter edition editor howpublished institution journal key month note number organization pages publisher school series title type volume year url } {} { label } INTEGERS { output.state before.all mid.sentence after.sentence after.block doblank straightnames} FUNCTION {init.state.consts} { #0 'before.all := #1 'mid.sentence := #2 'after.sentence := #3 'after.block := #0 'doblank := % put a blanks in output.nonnul if not zero #0 'straightnames := % force names to be J. B. Smith if not zero % otherwise they are Smith, J. B. % 2001 Nov 12: NAR changed back to the unstraight ... } STRINGS { s t } FUNCTION {between} { % what to do between output items TDS (AVOID COMMAS) doblank #0 = {" " * write$} {write$} if$ } FUNCTION {output.nonnull} { 's := output.state mid.sentence = % { ", " * write$ } % TDS NO COMMAS!!! { between } { output.state after.block = { % new as of 2001 jun 15: % zzz % add.period$ write$ % TDS PERIODS! write$ % TDS PERIODS! % prior to 2001 jun 15: %% add.period$ write$ % TDS NO PERIODS! % write$ % TDS NO PERIODS! newline$ % "\newblock " write$ % TDS NO NEWBLOCKS: makes for a cleaner file } { output.state before.all = 'write$ % { add.period$ " " * write$ } % TDS NO PERIODS!!! % { " " * write$ } % TDS NO PERIODS!!! {between} if$ } if$ mid.sentence 'output.state := } if$ s } FUNCTION {output} { duplicate$ empty$ 'pop$ 'output.nonnull if$ } FUNCTION {output.check} { 't := duplicate$ empty$ { pop$ "empty " t * " in " * cite$ * warning$ } 'output.nonnull if$ } FUNCTION {output.bibitem} { newline$ "\bibitem{" write$ cite$ write$ "}" write$ newline$ "" before.all 'output.state := } FUNCTION {fin.entry} { add.period$ write$ newline$ } FUNCTION {new.block} { output.state before.all = 'skip$ { after.block 'output.state := } if$ } FUNCTION {new.sentence} { output.state after.block = 'skip$ { output.state before.all = 'skip$ { after.sentence 'output.state := } if$ } if$ } FUNCTION {not} { { #0 } { #1 } if$ } FUNCTION {and} { 'skip$ { pop$ #0 } if$ } FUNCTION {or} { { pop$ #1 } 'skip$ if$ } FUNCTION {new.block.checka} { empty$ 'skip$ 'new.block if$ } FUNCTION {new.block.checkb} { empty$ swap$ empty$ and 'skip$ 'new.block if$ } FUNCTION {new.sentence.checka} { empty$ 'skip$ 'new.sentence if$ } FUNCTION {new.sentence.checkb} { empty$ swap$ empty$ and 'skip$ 'new.sentence if$ } FUNCTION {field.or.null} { duplicate$ empty$ { pop$ "" } 'skip$ if$ } FUNCTION {emphasize} { duplicate$ empty$ { pop$ "" } { "{\em " swap$ * "}" * } if$ } INTEGERS { nameptr namesleft numnames } FUNCTION {format.names} { 's := #1 'nameptr := s num.names$ 'numnames := numnames 'namesleft := { namesleft #0 > } { % the original format line: makes "J. D. Smith". TDS % s nameptr "{ff~}{vv~}{ll}{, jj}" format.name$ 't := % TDS old formatting % the new format line: makes "Smith, J. D.". TDS % s nameptr "{vv}{ll}{, jj}{, f.}" format.name$ 't := % TDS new formatting % note, no ~ so that the format is straight for NAR. straightnames #0 = { s nameptr "{vv~}{ll}{, jj}{, f.}" format.name$ 't := }% TDS; Langer % added blank after vv. 01.03.2010 Wolfram Langer { s nameptr "{ff{ }}{vv}{ ll}{, jj}" format.name$ 't := }% TDS if$ nameptr #1 > { namesleft #1 > { ", " * t * } { numnames #2 > { "," * } 'skip$ if$ t "others" = % { " et~al." * } % TDS { " et al." * } % TDS no ~ { " and " * t * } if$ } if$ } 't if$ nameptr #1 + 'nameptr := namesleft #1 - 'namesleft := } while$ } FUNCTION {format.authors} { author empty$ { "" } { author format.names } if$ } FUNCTION {format.editors} { % #1 'straightnames := % names go as J. B. Smith for editors % NAR Changed back!! 2001 Nov 12 TDS editor empty$ { "" } { editor format.names editor num.names$ #1 > { ", (eds.)" * } % 2001 Nov 12 TDS { ", (ed.)" * } % { ", editors" * } % { ", editor" * } if$ } if$ % #0 'straightnames := % names go as Smith, J. B. again } FUNCTION {format.title} { title empty$ { "" } % { title "t" change.case$ } % 2000 Sep 13 TDS put comma after title: % { title "," * "t" change.case$ } % 2001 Jun 15 TDS put period after title! % { title "." * "t" change.case$ } % Wolfram Langer, 15.12.2009: No dot after title, no change of the case. % TDS: 2010 Mar 07: No, there is a dot after the title, see: % http://nar.oxfordjournals.org/cgi/content/full/38/4/1182 { title "." * } if$ } FUNCTION {n.dashify} { 't := "" { t empty$ not } { t #1 #1 substring$ "-" = { t #1 #2 substring$ "--" = not { "--" * t #2 global.max$ substring$ 't := } { { t #1 #1 substring$ "-" = } { "-" * t #2 global.max$ substring$ 't := } while$ } if$ } { t #1 #1 substring$ * t #2 global.max$ substring$ 't := } if$ } while$ } FUNCTION {format.date} { year empty$ { month empty$ { "" } { "there's a month but no year in " cite$ * warning$ month } if$ } { month empty$ % 'year originally {"(" year ")" * * } % TDS {"(" month ", " year ")" * * * * } % TDS if$ } if$ } FUNCTION {format.btitle} { title %emphasize not for NAR! TDS } FUNCTION {tie.or.space.connect} { duplicate$ text.length$ #3 < { "~" } { " " } if$ swap$ * * } FUNCTION {either.or.check} { empty$ 'pop$ { "can't use both " swap$ * " fields in " * cite$ * warning$ } if$ } FUNCTION {format.bvolume} { volume empty$ { "" } % { "volume" volume tie.or.space.connect % TDS % TDS add a comma and bold % { "volume" "{\bf " volume "}, " * * tie.or.space.connect % 2001 Nov 12 no longer bold!! % { "volume" volume ", " * tie.or.space.connect % 2001 nov 12 now "Vol." % { "Vol." volume ", " * tie.or.space.connect { "Vol." volume tie.or.space.connect % TDS 2011 Dec 05 No comma yet! series empty$ % 'skip$ % PUT COMMA HERE INSTEAD OF SKIP! REMOVE COMMA ABOVE % TDS 2011 Dec 05 {", " *} % TDS %{ " of " * series emphasize * } TDS { " of " * series * ", " * } % TDS book titles not emphasized for NAR % TDS add comma 2011 Dec 05 if$ "volume and number" number either.or.check } if$ } FUNCTION {format.number.series} { volume empty$ { number empty$ { series field.or.null } { output.state mid.sentence = { "number" } { "Number" } if$ number tie.or.space.connect series empty$ { "there's a number but no series in " cite$ * warning$ } { " in " * series * } if$ } if$ } { "" } if$ } FUNCTION {format.edition} { edition empty$ { "" } { output.state mid.sentence = { " " edition * "l" change.case$ " edition" * } % TDS add space before { " " edition * "t" change.case$ " edition" * } % TDS add space before if$ } if$ } INTEGERS { multiresult } FUNCTION {multi.page.check} { 't := #0 'multiresult := { multiresult not t empty$ not and } { t #1 #1 substring$ duplicate$ "-" = swap$ duplicate$ "," = swap$ "+" = or or { #1 'multiresult := } { t #2 global.max$ substring$ 't := } if$ } while$ multiresult } FUNCTION {format.pages} { pages empty$ { "" } { pages multi.page.check % { "pages" pages n.dashify tie.or.space.connect } % TDS % { "page" pages tie.or.space.connect } % TDS { "pp." pages n.dashify tie.or.space.connect } % TDS { "p." pages tie.or.space.connect } % TDS if$ } if$ } FUNCTION {format.vol.num.pages} %{ volume * field.or.null { volume empty$ { "" } {"{\bf " volume * field.or.null "}" *} % TDS add boldface if$ number empty$ 'skip$ { "(" number * ")" * * volume empty$ { "there's a number but no volume in " cite$ * warning$ } 'skip$ if$ } if$ pages empty$ 'skip$ { duplicate$ empty$ { pop$ format.pages } % { ":" * pages n.dashify * } % TDS remove colon! { ", " * pages n.dashify * } % TDS replace colon with a comma if$ } if$ } FUNCTION {format.chapter.pages} { chapter empty$ 'format.pages { type empty$ { "chapter" } { type "l" change.case$ } if$ chapter tie.or.space.connect pages empty$ 'skip$ { ", " * format.pages * } if$ } if$ } FUNCTION {format.in.ed.booktitle} { booktitle empty$ { "" } { editor empty$ % add colon after "In" %{ "In " booktitle emphasize * } % TDS %{ "In " format.editors * ", " * booktitle emphasize * % { "In " booktitle *} % TDS no emphasis in nar! % 2001 Nov 12 Now Nar wants emph!! { "In " "\emph{" booktitle "}" * * * % 2011 Dec 23 thanks to dkoes - a * was missing } % TDS now emphasis in nar! { "In " format.editors * ", " * "\emph{" booktitle "}" * * * % TDS now emphasis in nar! ", " * } % TDS and tack on a comma if$ } if$ } FUNCTION {empty.misc.check} { author empty$ title empty$ howpublished empty$ month empty$ year empty$ note empty$ and and and and and { "all relevant fields are empty in " cite$ * warning$ } 'skip$ if$ } FUNCTION {format.thesis.type} { type empty$ 'skip$ { pop$ type "t" change.case$ } if$ } FUNCTION {format.tr.number} { type empty$ { "Technical Report" } 'type if$ number empty$ { "t" change.case$ } { number tie.or.space.connect } if$ } FUNCTION {format.article.crossref} { key empty$ { journal empty$ { "need key or journal for " cite$ * " to crossref " * crossref * warning$ "" } { "In {\em " journal * "\/}" * } % TDS if$ } { "In " key * } % TDS if$ " \cite{" * crossref * "}" * } FUNCTION {format.crossref.editor} { editor #1 "{vv~}{ll}" format.name$ editor num.names$ duplicate$ #2 > { pop$ " et~al." * } { #2 < 'skip$ { editor #2 "{ff }{vv }{ll}{ jj}" format.name$ "others" = { " et~al." * } { " and " * editor #2 "{vv~}{ll}" format.name$ * } if$ } if$ } if$ } FUNCTION {format.book.crossref} { volume empty$ { "empty volume in " cite$ * "'s crossref of " * crossref * warning$ "In " % TDS } { "Volume" volume tie.or.space.connect " of " * } if$ editor empty$ editor field.or.null author field.or.null = or { key empty$ { series empty$ { "need editor, key, or series for " cite$ * " to crossref " * crossref * warning$ "" * } { "{\em " * series * "\/}" * } if$ } { key * } if$ } { format.crossref.editor * } if$ " \cite{" * crossref * "}" * } FUNCTION {format.incoll.inproc.crossref} { editor empty$ editor field.or.null author field.or.null = or { key empty$ { booktitle empty$ { "need editor, key, or booktitle for " cite$ * " to crossref " * crossref * warning$ "" } { "In " booktitle * } % TDS if$ } { "In " key * } % TDS if$ } { "In " format.crossref.editor * } % TDS if$ " \cite{" * crossref * "}" * } % Wolfram Langer, 15.12.2009 FUNCTION {format.url} { url empty$ { "" } {"\url{" url * "}" *} if$ } FUNCTION {article} { output.bibitem format.authors "author" output.check format.date "year" output.check % TDS move date to here new.block % format.title "title" output.check % TDS NO TITLES format.title "title" output.check % TDS NO TITLES; titles as of 2000 Sep 13 new.block % zzz crossref missing$ { journal "," * emphasize "journal" output.check %TDS add , format.vol.num.pages output % format.date "year" output.check % TDS move date } { format.article.crossref output.nonnull format.pages output } if$ new.block note output fin.entry } FUNCTION {book} { output.bibitem author empty$ { format.editors "author and editor" output.check } { format.authors output.nonnull crossref missing$ { "author and editor" editor either.or.check } 'skip$ if$ } if$ format.date "year" output.check % TDS new location new.block #1 'doblank := % remove blanks TDS format.btitle "title" output.check ", " output % give it a comma after the title TDS crossref missing$ { format.bvolume output new.block format.number.series output new.sentence publisher "publisher" output.check ", " output % give it a comma after the publisher TDS address output } { new.block format.book.crossref output.nonnull } if$ format.edition output % format.date "year" output.check % TDS former location new.block note output fin.entry #0 'doblank := % blanks again TDS } FUNCTION {booklet} { output.bibitem format.authors output new.block format.title "title" output.check howpublished address new.block.checkb howpublished output address output format.date output new.block note output fin.entry } FUNCTION {inbook} { output.bibitem author empty$ { format.editors "author and editor" output.check } { format.authors output.nonnull crossref missing$ { "author and editor" editor either.or.check } 'skip$ if$ } if$ new.block format.btitle "title" output.check crossref missing$ { format.bvolume output format.chapter.pages "chapter and pages" output.check new.block format.number.series output new.sentence publisher "publisher" output.check address output } { format.chapter.pages "chapter and pages" output.check new.block format.book.crossref output.nonnull } if$ format.edition output format.date "year" output.check new.block note output fin.entry } FUNCTION {incollection} { output.bibitem format.authors "author" output.check format.date "year" output.check % TDS new.block format.title "title" output.check new.block crossref missing$ { format.in.ed.booktitle "booktitle" output.check format.bvolume output format.number.series output format.chapter.pages output new.sentence publisher "publisher" output.check address output format.edition output % format.date "year" output.check % TDS } { format.incoll.inproc.crossref output.nonnull format.chapter.pages output } if$ new.block note output fin.entry } FUNCTION {inproceedings} { output.bibitem format.authors "author" output.check format.date "year" output.check % TDS new.block format.title "title" output.check % TDS NO TITLE, titles 2000 Sep 13 % 2001 Nov 12 Now make this title emph!! % TDS NO TITLE, titles 2000 Sep 13 new.block crossref missing$ { format.in.ed.booktitle "booktitle" %"\emph{" % "}" * * output.check % qqq % format.bvolume output % format.number.series output % format.pages output % TDS pages go at the end address empty$ { organization publisher new.sentence.checkb organization output % 2001 nov 12: no longer colon! TDS % ": " output % TDS put a colon publisher output % format.date "year" output.check } { address output.nonnull % format.date "year" output.check new.sentence #1 'doblank := % remove blanks organization output ": " output % TDS put a colon after the location publisher output % ". " output % TDS put a period after the publisher #0 'doblank := % put back blanks } if$ } { format.incoll.inproc.crossref output.nonnull % format.pages output % TDS pages go at the end } if$ new.block note output format.bvolume output % TDS goes at end format.number.series output % TDS goes at end format.pages output % TDS pages go at the end fin.entry } FUNCTION {conference} { inproceedings } FUNCTION {manual} { output.bibitem author empty$ { organization empty$ 'skip$ { organization output.nonnull address output } if$ } { format.authors output.nonnull } if$ new.block format.btitle "title" output.check author empty$ { organization empty$ { address new.block.checka address output } 'skip$ if$ } { organization address new.block.checkb organization output address output } if$ format.edition output format.date output new.block note output fin.entry } FUNCTION {mastersthesis} { output.bibitem format.authors "author" output.check new.block format.title "title" output.check new.block "Master's thesis" format.thesis.type output.nonnull school "school" output.check address output format.date "year" output.check new.block note output fin.entry } FUNCTION {misc} { output.bibitem format.authors output title howpublished new.block.checkb format.title output howpublished new.block.checka howpublished output format.date output new.block note output fin.entry empty.misc.check } % Wolfram Langer, 15.12.2009 FUNCTION {electronic} { output.bibitem format.authors "author" output.check note output format.date "year" output.check new.block title ", available: " * format.url * "title" output.check fin.entry } FUNCTION {phdthesis} { output.bibitem format.authors "author" output.check new.block format.btitle "title" output.check new.block "PhD thesis" format.thesis.type output.nonnull school "school" output.check address output format.date "year" output.check new.block note output fin.entry } FUNCTION {proceedings} { output.bibitem editor empty$ { organization output } { format.editors output.nonnull } if$ new.block format.btitle "title" output.check format.bvolume output format.number.series output address empty$ { editor empty$ { publisher new.sentence.checka } { organization publisher new.sentence.checkb organization output } if$ publisher output format.date "year" output.check } { address output.nonnull format.date "year" output.check new.sentence editor empty$ 'skip$ { organization output } if$ publisher output } if$ new.block note output fin.entry } FUNCTION {techreport} { output.bibitem format.authors ", " * "author" output.check new.block format.title "title" output.check new.block format.tr.number ", " * output.nonnull institution "institution" output.check address output format.date "year" output.check new.block note output fin.entry } FUNCTION {unpublished} { output.bibitem format.authors "author" output.check new.block format.date output format.title "title" output.check % titles as of 2000 Sep 13 % format.title ", " * "title" output.check new.block note "note" output.check fin.entry } FUNCTION {default.type} { misc } MACRO {jan} {"January"} MACRO {feb} {"February"} MACRO {mar} {"March"} MACRO {apr} {"April"} MACRO {may} {"May"} MACRO {jun} {"June"} MACRO {jul} {"July"} MACRO {aug} {"August"} MACRO {sep} {"September"} MACRO {oct} {"October"} MACRO {nov} {"November"} MACRO {dec} {"December"} MACRO {acmcs} {"ACM Computing Surveys"} MACRO {acta} {"Acta Informatica"} MACRO {cacm} {"Communications of the ACM"} MACRO {ibmjrd} {"IBM Journal of Research and Development"} MACRO {ibmsj} {"IBM Systems Journal"} MACRO {ieeese} {"IEEE Transactions on Software Engineering"} MACRO {ieeetc} {"IEEE Transactions on Computers"} MACRO {ieeetcad} {"IEEE Transactions on Computer-Aided Design of Integrated Circuits"} MACRO {ipl} {"Information Processing Letters"} MACRO {jacm} {"Journal of the ACM"} MACRO {jcss} {"Journal of Computer and System Sciences"} MACRO {scp} {"Science of Computer Programming"} MACRO {sicomp} {"SIAM Journal on Computing"} MACRO {tocs} {"ACM Transactions on Computer Systems"} MACRO {tods} {"ACM Transactions on Database Systems"} MACRO {tog} {"ACM Transactions on Graphics"} MACRO {toms} {"ACM Transactions on Mathematical Software"} MACRO {toois} {"ACM Transactions on Office Information Systems"} MACRO {toplas} {"ACM Transactions on Programming Languages and Systems"} MACRO {tcs} {"Theoretical Computer Science"} READ STRINGS { longest.label } INTEGERS { number.label longest.label.width } FUNCTION {initialize.longest.label} { "" 'longest.label := #1 'number.label := #0 'longest.label.width := } FUNCTION {longest.label.pass} { number.label int.to.str$ 'label := number.label #1 + 'number.label := label width$ longest.label.width > { label 'longest.label := label width$ 'longest.label.width := } 'skip$ if$ } EXECUTE {initialize.longest.label} ITERATE {longest.label.pass} FUNCTION {begin.bib} { preamble$ empty$ 'skip$ { preamble$ write$ newline$ } if$ "\begin{thebibliography}{" longest.label * "}" * write$ newline$ } EXECUTE {begin.bib} EXECUTE {init.state.consts} ITERATE {call.type$} FUNCTION {end.bib} { newline$ "\end{thebibliography}" write$ newline$ } EXECUTE {end.bib}