CTAN Comprehensive TeX Archive Network

CTAN upload notification: shade v1.11

Date: April 14, 2005 6:24:37 PM CEST
On Thu, 14 Apr 2005 Eric Beitz submitted an update to the package texshade to CTAN. Location on CTAN: macros/latex/contrib/texshade/ Summary description: Update of the DNA and protein sequence alignment LaTeX package TeXshade License type: gpl Announcement text:
This is another update of the DNA and protein sequence alignment shading package TeXshade (v1.11). This update deals mainly with the exploitation of the recently introduced bar graphs and color scales which can be plotted in the feature lines along the alignment. Now, amino acid properties, such as hydrophobicity, charge and molecular weight, can be displayed as well as the degree of sequence conservation. Further minor improvements have been implemented.
Thanks for the update. For the CTAN Team Rainer Schöpf

texshade – Package for setting nucleotide and peptide alignments

shade is alignment shading software completely written in /; it can process multiple sequence alignments in the .MSF and the .ALN file formats. In addition to common shading algorithms, it provides special shading modes showing functional aspects, e.g. charge or hydropathy, and a wide range of commands for handling shading colours, text styles, labels, legends; it even allows the user to define completely new shading modes. shade combines highest flexibility with output quality — all in a bundle that does not demand excessive development time of the user.

Copyright1999–2024 Eric Beitz
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