CTAN Comprehensive TeX Archive Network

CTAN Up­date: shade v1.16

Date: Fe­bru­ary 19, 2007 5:39:36 PM CET
On Mon, 19 Feb 2007, Eric Beitz sub­mit­ted an up­date to the texshade pack­age. TeXshade is an align­ment shad­ing soft­ware com­pletely writ­ten in TeX/LaTeX which can pro­cess mul­ti­ple se­quence align­ments in the .MSF and the .ALN file for­mat. It pro­vides in ad­di­tion to com­mon shad­ing al­go­rithms spe­cial shad­ing modes fea­tur­ing func­tional as­pects, e.g. charge or hy­dropa­thy, and a plen­i­tude of com­mands for han­dling shad­ing colours, text styles, la­bels, leg­ends and even al­lows the user to de­fine com­pletely new shad­ing modes. TeXshade com­bines high­est flex­i­bil­ity and the ha­bit­ual TeX out­put qual­ity-with rea­son­able time ex­pen­di­ture. Lo­ca­tion on CTAN: /macros/la­tex/con­trib/texshade/ Sum­mary de­scrip­tion: Up­date of the DNA and pro­tein se­quence align­ment LaTeX pack­age TeXshade Li­cense type: lppl An­nounce­ment text:
This is a new re­lease (v1.16) of TeXshade. It fixes prob­lems with un­usual residues names, such as `O' or `X' and in­tro­duces new com­mands for more flex­i­bil­ity with the ruler and for ex­port­ing the con­sen­sus shad­ing col­ors as a py­mol script for shad­ing 3D pro­tein mod­els. Fur­ther, BioTeX, i.e. TeXshade and TeX­topo, have a new home, see README or doc­u­men­ta­tion.
This pack­age is lo­cated at http://dante.ctan.org/tex-archive/macros/la­tex/con­trib/texshade/ . More in­for­ma­tion is at http://tug.ctan.org/info/?id=texshade (if the pack­age is new it may take a day for that in­for­ma­tion to ap­pear). We are sup­ported by the TeX Users Group http://www.tug.org . Please join a users group; see http://www.tug.org/user­groups.html . _______________________________________________ Thanks for the up­load. For the CTAN Team Rainer Schöpf

texshade – Pack­age for set­ting nu­cleotide and pep­tide align­ments

shade is align­ment shad­ing soft­ware com­pletely writ­ten in /; it can pro­cess mul­ti­ple se­quence align­ments in the .MSF and the .ALN file for­mats. In ad­di­tion to com­mon shad­ing al­go­rithms, it pro­vides spe­cial shad­ing modes show­ing func­tional as­pects, e.g. charge or hy­dropa­thy, and a wide range of com­mands for han­dling shad­ing colours, text styles, la­bels, leg­ends; it even al­lows the user to de­fine com­pletely new shad­ing modes. shade com­bines high­est flex­i­bil­ity with out­put qual­ity — all in a bun­dle that does not de­mand ex­ces­sive de­vel­op­ment time of the user.

Pack­agetexshade
Ver­sion1.25
Copy­right1999–2018 Eric Beitz
Main­tainerEric Beitz

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